Table 1 16 tasks in this task list are run to solve a clinical scenario
Investigate process | Tasks |
|---|---|
Navigate the scatter plot to feel comfortable | 1. Zoom in/out the patient cohort |
2. Move the patient cohort | |
3. Rotate the scatter plot | |
Choose your patient of interest (POI), e.g. a high-risk patient | 4. Select a patient |
Check the selected patient’s gene data visualisations. And compare with another patient’s information | 5. Open an Individual Patient and see the patient details |
6. Change to another patient with similar gene data (a neighbour patient) or very different gene data (a faraway patient) | |
Compare the patient with another far away patient, and a neighbour patient | 7. Open the Patient-to-Patient panel, drag two patients to patient comparison and compare two patients |
8. Change patient to compare different pair of patients | |
Mark a patient for future use | 9. Mark a patient |
Compare the marked patient with a similar group, check the heatmap, boxplot and table list. Choose a faraway group to compare. Find the marked patient to investigate | 10. Open a patient to group comparation panel, compare one patient to a group of patients |
11. Show a heatmap, show 3D heatmap, modify the hierarchy | |
12. Show the box plot, a table list plot | |
13. Clear patient list and drag other patients | |
14. Choose a marked patient | |
Choose another dataset and model | 15. Choose another dataset and another machine learning model |
More explorations | 16. Use the new dataset and new model to repeat some of the above steps 1–13 |